Spaces:
Running
Running
Plesae make an app teaching machanism of General organic reactions in a magnificient way - Initial Deployment
Browse files- README.md +5 -3
- index.html +573 -19
- prompts.txt +1 -0
README.md
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---
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title:
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colorFrom: gray
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colorTo: purple
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sdk: static
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pinned: false
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---
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Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference
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---
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title: mechanism
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emoji: 🐳
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colorFrom: gray
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colorTo: purple
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sdk: static
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pinned: false
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tags:
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- deepsite
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---
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Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference
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index.html
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| 1 |
+
<!DOCTYPE html>
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| 2 |
+
<html lang="en">
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| 3 |
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<head>
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| 4 |
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<meta charset="UTF-8">
|
| 5 |
+
<meta name="viewport" content="width=device-width, initial-scale=1.0">
|
| 6 |
+
<title>Organic Reaction Mechanisms | Interactive Learning</title>
|
| 7 |
+
<script src="https://cdn.tailwindcss.com"></script>
|
| 8 |
+
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.0/css/all.min.css">
|
| 9 |
+
<style>
|
| 10 |
+
.mechanism-step {
|
| 11 |
+
transition: all 0.5s ease;
|
| 12 |
+
}
|
| 13 |
+
.electron-flow {
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| 14 |
+
stroke-dasharray: 10;
|
| 15 |
+
animation: dash 2s linear infinite;
|
| 16 |
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stroke: #3b82f6;
|
| 17 |
+
stroke-width: 2px;
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| 18 |
+
fill: none;
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| 19 |
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}
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| 20 |
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@keyframes dash {
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| 21 |
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to {
|
| 22 |
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stroke-dashoffset: 100;
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| 23 |
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}
|
| 24 |
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}
|
| 25 |
+
.reagent-hover:hover {
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| 26 |
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transform: translateY(-5px);
|
| 27 |
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box-shadow: 0 10px 25px rgba(59, 130, 246, 0.3);
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| 28 |
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}
|
| 29 |
+
.molecule {
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| 30 |
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transition: all 0.3s ease;
|
| 31 |
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}
|
| 32 |
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.active-molecule {
|
| 33 |
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transform: scale(1.05);
|
| 34 |
+
box-shadow: 0 0 15px rgba(59, 130, 246, 0.5);
|
| 35 |
+
}
|
| 36 |
+
.progress-arrow {
|
| 37 |
+
animation: bounce 1.5s infinite;
|
| 38 |
+
}
|
| 39 |
+
@keyframes bounce {
|
| 40 |
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0%, 100% { transform: translateX(0); }
|
| 41 |
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50% { transform: translateX(10px); }
|
| 42 |
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}
|
| 43 |
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.canvas-container {
|
| 44 |
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perspective: 1000px;
|
| 45 |
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}
|
| 46 |
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.molecule-canvas {
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| 47 |
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transform-style: preserve-3d;
|
| 48 |
+
transition: transform 1s;
|
| 49 |
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}
|
| 50 |
+
.rotate-x {
|
| 51 |
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transform: rotateX(15deg);
|
| 52 |
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}
|
| 53 |
+
.rotate-y {
|
| 54 |
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transform: rotateY(15deg);
|
| 55 |
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}
|
| 56 |
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</style>
|
| 57 |
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</head>
|
| 58 |
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<body class="bg-gray-100 min-h-screen font-sans">
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| 59 |
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<header class="bg-indigo-900 text-white shadow-lg">
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| 60 |
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<div class="container mx-auto px-4 py-6">
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| 61 |
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<div class="flex justify-between items-center">
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| 62 |
+
<div class="flex items-center space-x-2">
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| 63 |
+
<i class="fas fa-atom text-3xl text-yellow-400 animate-spin" style="animation-duration: 10s;"></i>
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| 64 |
+
<h1 class="text-3xl font-bold">Organic Reaction Explorer</h1>
|
| 65 |
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</div>
|
| 66 |
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<nav class="hidden md:flex space-x-6">
|
| 67 |
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<a href="#" class="hover:text-yellow-300 transition">Home</a>
|
| 68 |
+
<a href="#" class="hover:text-yellow-300 transition">Mechanisms</a>
|
| 69 |
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<a href="#" class="hover:text-yellow-300 transition">Reactions</a>
|
| 70 |
+
<a href="#" class="hover:text-yellow-300 transition">Quiz</a>
|
| 71 |
+
</nav>
|
| 72 |
+
<button class="md:hidden text-xl">
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| 73 |
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<i class="fas fa-bars"></i>
|
| 74 |
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</button>
|
| 75 |
+
</div>
|
| 76 |
+
<div class="mt-6 text-center">
|
| 77 |
+
<h2 class="text-4xl font-bold mb-4">Discover the Magic of Reaction Mechanisms</h2>
|
| 78 |
+
<p class="text-xl text-indigo-200 max-w-3xl mx-auto">Interactive learning platform to visualize and understand organic chemistry reaction pathways</p>
|
| 79 |
+
</div>
|
| 80 |
+
</div>
|
| 81 |
+
</header>
|
| 82 |
+
|
| 83 |
+
<main class="container mx-auto px-4 py-8">
|
| 84 |
+
<div class="grid grid-cols-1 lg:grid-cols-3 gap-8">
|
| 85 |
+
<!-- Sidebar with reactions list -->
|
| 86 |
+
<div class="lg:col-span-1 bg-white rounded-xl shadow-md p-6 h-fit sticky top-4">
|
| 87 |
+
<h3 class="text-2xl font-bold text-indigo-800 mb-6 flex items-center">
|
| 88 |
+
<i class="fas fa-flask mr-2"></i> Reaction Library
|
| 89 |
+
</h3>
|
| 90 |
+
<div class="space-y-3">
|
| 91 |
+
<button onclick="showMechanism('sn2')" class="w-full text-left p-3 rounded-lg hover:bg-indigo-50 transition flex items-center justify-between reagent-hover">
|
| 92 |
+
<span>Nucleophilic Substitution (SN²)</span>
|
| 93 |
+
<i class="fas fa-arrow-right text-indigo-600"></i>
|
| 94 |
+
</button>
|
| 95 |
+
<button onclick="showMechanism('sn1')" class="w-full text-left p-3 rounded-lg hover:bg-indigo-50 transition flex items-center justify-between reagent-hover">
|
| 96 |
+
<span>Nucleophilic Substitution (SN¹)</span>
|
| 97 |
+
<i class="fas fa-arrow-right text-indigo-600"></i>
|
| 98 |
+
</button>
|
| 99 |
+
<button onclick="showMechanism('e2')" class="w-full text-left p-3 rounded-lg hover:bg-indigo-50 transition flex items-center justify-between reagent-hover">
|
| 100 |
+
<span>Elimination (E2)</span>
|
| 101 |
+
<i class="fas fa-arrow-right text-indigo-600"></i>
|
| 102 |
+
</button>
|
| 103 |
+
<button onclick="showMechanism('e1')" class="w-full text-left p-3 rounded-lg hover:bg-indigo-50 transition flex items-center justify-between reagent-hover">
|
| 104 |
+
<span>Elimination (E1)</span>
|
| 105 |
+
<i class="fas fa-arrow-right text-indigo-600"></i>
|
| 106 |
+
</button>
|
| 107 |
+
<button onclick="showMechanism('addition')" class="w-full text-left p-3 rounded-lg hover:bg-indigo-50 transition flex items-center justify-between reagent-hover">
|
| 108 |
+
<span>Electrophilic Addition</span>
|
| 109 |
+
<i class="fas fa-arrow-right text-indigo-600"></i>
|
| 110 |
+
</button>
|
| 111 |
+
<button onclick="showMechanism('esterification')" class="w-full text-left p-3 rounded-lg hover:bg-indigo-50 transition flex items-center justify-between reagent-hover">
|
| 112 |
+
<span>Esterification</span>
|
| 113 |
+
<i class="fas fa-arrow-right text-indigo-600"></i>
|
| 114 |
+
</button>
|
| 115 |
+
</div>
|
| 116 |
+
|
| 117 |
+
<div class="mt-8 bg-yellow-50 border-l-4 border-yellow-400 p-4 rounded-r-lg">
|
| 118 |
+
<h4 class="font-bold text-yellow-800 flex items-center">
|
| 119 |
+
<i class="fas fa-lightbulb mr-2"></i> Quick Tip
|
| 120 |
+
</h4>
|
| 121 |
+
<p class="text-yellow-700 mt-2">Mechanisms show how electrons move during reactions. Follow the electron flow to understand bond changes!</p>
|
| 122 |
+
</div>
|
| 123 |
+
</div>
|
| 124 |
+
|
| 125 |
+
<!-- Main content area with mechanisms -->
|
| 126 |
+
<div class="lg:col-span-2 space-y-8">
|
| 127 |
+
<!-- Mechanism introduction -->
|
| 128 |
+
<div id="mechanism-intro" class="bg-white rounded-xl shadow-md p-6">
|
| 129 |
+
<h2 class="text-3xl font-bold text-indigo-800 mb-4">Welcome to Reaction Mechanisms!</h2>
|
| 130 |
+
<p class="text-gray-700 mb-4">Organic reaction mechanisms are step-by-step descriptions of how reactions occur at the molecular level. Understanding these pathways is key to mastering organic chemistry.</p>
|
| 131 |
+
<p class="text-gray-700 mb-4">Select a reaction from the left panel to explore its mechanism in detail with interactive animations and explanations.</p>
|
| 132 |
+
<img src="https://cdn.pixabay.com/photo/2016/06/08/14/55/molecule-1444300_960_720.png" alt="Organic molecule" class="w-full h-48 object-contain mt-4 opacity-80">
|
| 133 |
+
</div>
|
| 134 |
+
|
| 135 |
+
<!-- SN2 Mechanism (default shown) -->
|
| 136 |
+
<div id="sn2-mechanism" class="mechanism-content bg-white rounded-xl shadow-md p-6 hidden">
|
| 137 |
+
<div class="flex justify-between items-center mb-6">
|
| 138 |
+
<h2 class="text-2xl font-bold text-indigo-800">Nucleophilic Substitution (SN²) Mechanism</h2>
|
| 139 |
+
<span class="bg-green-100 text-green-800 px-3 py-1 rounded-full text-sm font-medium">Bimolecular</span>
|
| 140 |
+
</div>
|
| 141 |
+
|
| 142 |
+
<div class="mb-6">
|
| 143 |
+
<p class="text-gray-700 mb-3">SN² reactions involve a nucleophile attacking the electrophilic carbon from the opposite side of the leaving group. All bonds change in one concerted step.</p>
|
| 144 |
+
<div class="bg-indigo-50 p-4 rounded-lg">
|
| 145 |
+
<h4 class="font-bold text-indigo-700">Key Features:</h4>
|
| 146 |
+
<ul class="list-disc pl-5 mt-2 text-indigo-700 space-y-1">
|
| 147 |
+
<li>Concerted mechanism (single step)</li>
|
| 148 |
+
<li>Stereospecific (inversion of configuration)</li>
|
| 149 |
+
<li>Rate depends on both substrate and nucleophile</li>
|
| 150 |
+
<li>Preferred for primary and methyl substrates</li>
|
| 151 |
+
</ul>
|
| 152 |
+
</div>
|
| 153 |
+
</div>
|
| 154 |
+
|
| 155 |
+
<div class="canvas-container mb-8">
|
| 156 |
+
<div class="bg-gray-50 border-2 border-gray-200 rounded-lg p-4">
|
| 157 |
+
<svg viewBox="0 0 800 300" class="w-full h-auto">
|
| 158 |
+
<!-- Substrate -->
|
| 159 |
+
<g class="molecule substrate" id="substrate-sn2">
|
| 160 |
+
<text x="150" y="150" class="text-xl font-bold fill-indigo-800">CH3-Br</text>
|
| 161 |
+
<circle cx="200" cy="150" r="8" fill="#10b981" />
|
| 162 |
+
<text x="200" y="190" class="text-sm fill-gray-600">Leaving Group (Br⁻)</text>
|
| 163 |
+
<path d="M185,150 L215,150" stroke="black" stroke-width="2" />
|
| 164 |
+
</g>
|
| 165 |
+
|
| 166 |
+
<!-- Nucleophile -->
|
| 167 |
+
<g class="molecule nucleophile" id="nucleophile-sn2">
|
| 168 |
+
<text x="450" y="150" class="text-xl font-bold fill-indigo-800">OH⁻</text>
|
| 169 |
+
<circle cx="400" cy="150" r="8" fill="#3b82f6" />
|
| 170 |
+
<text x="400" y="190" class="text-sm fill-gray-600">Nucleophile (OH⁻)</text>
|
| 171 |
+
</g>
|
| 172 |
+
|
| 173 |
+
<!-- Electron flow arrows -->
|
| 174 |
+
<path id="sn2-arrow" class="electron-flow" d="M400,150 Q300,150 235,150" marker-end="url(#arrowhead)" />
|
| 175 |
+
<defs>
|
| 176 |
+
<marker id="arrowhead" markerWidth="10" markerHeight="7" refX="0" refY="3.5" orient="auto">
|
| 177 |
+
<polygon points="0 0, 10 3.5, 0 7" fill="#3b82f6" />
|
| 178 |
+
</marker>
|
| 179 |
+
</defs>
|
| 180 |
+
|
| 181 |
+
<!-- Transition state -->
|
| 182 |
+
<g id="transition-state-sn2" class="opacity-0 hidden">
|
| 183 |
+
<rect x="250" y="110" width="100" height="80" rx="10" fill="#fef3c7" stroke="#f59e0b" stroke-width="2" />
|
| 184 |
+
<text x="300" y="150" text-anchor="middle" class="font-bold fill-amber-800">Transition State</text>
|
| 185 |
+
<path d="M250,150 L350,150" stroke="#f59e0b" stroke-width="2" />
|
| 186 |
+
<text x="300" y="170" text-anchor="middle" class="text-sm fill-gray-600">Partial bonds</text>
|
| 187 |
+
</g>
|
| 188 |
+
|
| 189 |
+
<!-- Product -->
|
| 190 |
+
<g id="product-sn2" class="opacity-0">
|
| 191 |
+
<text x="550" y="150" class="text-xl font-bold fill-indigo-800">CH3-OH + Br⁻</text>
|
| 192 |
+
<text x="550" y="190" class="text-sm fill-gray-600">Products</text>
|
| 193 |
+
</g>
|
| 194 |
+
</svg>
|
| 195 |
+
</div>
|
| 196 |
+
</div>
|
| 197 |
+
|
| 198 |
+
<div class="flex flex-col md:flex-row gap-4 mb-6">
|
| 199 |
+
<button onclick="animateSN2()" class="flex-1 bg-indigo-600 hover:bg-indigo-700 text-white py-3 px-6 rounded-lg transition flex items-center justify-center">
|
| 200 |
+
<i class="fas fa-play-circle mr-2"></i> Animate Mechanism
|
| 201 |
+
</button>
|
| 202 |
+
<button onclick="resetSN2()" class="flex-1 bg-gray-200 hover:bg-gray-300 text-gray-800 py-3 px-6 rounded-lg transition flex items-center justify-center">
|
| 203 |
+
<i class="fas fa-redo mr-2"></i> Reset Animation
|
| 204 |
+
</button>
|
| 205 |
+
</div>
|
| 206 |
+
|
| 207 |
+
<div class="bg-blue-50 border-l-4 border-blue-400 p-4 rounded-r-lg">
|
| 208 |
+
<h4 class="font-bold text-blue-800">Mechanism Steps:</h4>
|
| 209 |
+
<ol class="list-decimal pl-5 mt-2 text-blue-700 space-y-2">
|
| 210 |
+
<li>The nucleophile (OH⁻) approaches the carbon atom from the opposite side of the leaving group (Br⁻)</li>
|
| 211 |
+
<li>Simultaneous bond formation (C-OH) and bond breaking (C-Br)</li>
|
| 212 |
+
<li>The transition state forms with partial bonds to both groups</li>
|
| 213 |
+
<li>Complete inversion of configuration at the carbon center</li>
|
| 214 |
+
</ol>
|
| 215 |
+
</div>
|
| 216 |
+
</div>
|
| 217 |
+
|
| 218 |
+
<!-- SN1 Mechanism -->
|
| 219 |
+
<div id="sn1-mechanism" class="mechanism-content bg-white rounded-xl shadow-md p-6 hidden">
|
| 220 |
+
<div class="flex justify-between items-center mb-6">
|
| 221 |
+
<h2 class="text-2xl font-bold text-indigo-800">Nucleophilic Substitution (SN¹) Mechanism</h2>
|
| 222 |
+
<span class="bg-purple-100 text-purple-800 px-3 py-1 rounded-full text-sm font-medium">Unimolecular</span>
|
| 223 |
+
</div>
|
| 224 |
+
|
| 225 |
+
<div class="mb-6">
|
| 226 |
+
<p class="text-gray-700 mb-3">SN¹ reactions occur in two steps: first the leaving group departs to form a carbocation intermediate, then the nucleophile attacks.</p>
|
| 227 |
+
<div class="bg-purple-50 p-4 rounded-lg">
|
| 228 |
+
<h4 class="font-bold text-purple-700">Key Features:</h4>
|
| 229 |
+
<ul class="list-disc pl-5 mt-2 text-purple-700 space-y-1">
|
| 230 |
+
<li>Two-step mechanism</li>
|
| 231 |
+
<li>Forms carbocation intermediate</li>
|
| 232 |
+
<li>Racemization occurs at chiral centers</li>
|
| 233 |
+
<li>Rate depends only on substrate concentration</li>
|
| 234 |
+
<li>Preferred for tertiary and secondary substrates</li>
|
| 235 |
+
<li>Often competes with E1 elimination</li>
|
| 236 |
+
</ul>
|
| 237 |
+
</div>
|
| 238 |
+
</div>
|
| 239 |
+
|
| 240 |
+
<div class="grid grid-cols-1 md:grid-cols-3 gap-4 mb-6">
|
| 241 |
+
<!-- Step 1 -->
|
| 242 |
+
<div class="bg-gray-100 rounded-lg p-4 mechanism-step" id="sn1-step1">
|
| 243 |
+
<h4 class="font-bold text-purple-700 mb-2">Step 1: Ionization</h4>
|
| 244 |
+
<div class="flex justify-center">
|
| 245 |
+
<svg viewBox="0 0 200 100" class="w-full">
|
| 246 |
+
<text x="100" y="40" text-anchor="middle" class="text-sm fill-gray-700">CH3-C-CH3</text>
|
| 247 |
+
<text x="100" y="45" text-anchor="middle" class="text-sm fill-gray-700">|</text>
|
| 248 |
+
<text x="100" y="55" text-anchor="middle" class="text-sm fill-gray-700">Br</text>
|
| 249 |
+
<path d="M100,60 L100,80" stroke="black" stroke-width="1" />
|
| 250 |
+
<text x="100" y="95" text-anchor="middle" class="text-xs fill-gray-500">(slow)</text>
|
| 251 |
+
|
| 252 |
+
<g id="sn1-leaving-group" class="opacity-0">
|
| 253 |
+
<path d="M100,80 L120,100" stroke="#ef4444" stroke-width="2" marker-end="url(#arrowhead-red)" />
|
| 254 |
+
<circle cx="120" cy="100" r="5" fill="#ef4444" />
|
| 255 |
+
<text x="130" y="100" class="text-xs fill-gray-700">Br⁻</text>
|
| 256 |
+
</g>
|
| 257 |
+
|
| 258 |
+
<g id="sn1-carbocation" class="opacity-0">
|
| 259 |
+
<text x="100" y="70" text-anchor="middle" class="text-sm fill-red-600">+</text>
|
| 260 |
+
<circle cx="100" cy="80" r="15" fill="none" stroke="#ef4444" stroke-width="2" stroke-dasharray="5,5" />
|
| 261 |
+
</g>
|
| 262 |
+
</svg>
|
| 263 |
+
</div>
|
| 264 |
+
</div>
|
| 265 |
+
|
| 266 |
+
<!-- Progress arrow -->
|
| 267 |
+
<div class="flex items-center justify-center progress-arrow">
|
| 268 |
+
<i class="fas fa-arrow-right text-2xl text-purple-500"></i>
|
| 269 |
+
</div>
|
| 270 |
+
|
| 271 |
+
<!-- Step 2 -->
|
| 272 |
+
<div class="bg-gray-100 rounded-lg p-4 mechanism-step" id="sn1-step2">
|
| 273 |
+
<h4 class="font-bold text-purple-700 mb-2">Step 2: Nucleophilic Attack</h4>
|
| 274 |
+
<div class="flex justify-center">
|
| 275 |
+
<svg viewBox="0 0 200 100" class="w-full">
|
| 276 |
+
<g id="sn1-nucleophile" class="opacity-0">
|
| 277 |
+
<circle cx="50" cy="50" r="5" fill="#3b82f6" />
|
| 278 |
+
<text x="40" y="50" class="text-xs fill-gray-700">OH⁻</text>
|
| 279 |
+
<path d="M55,50 L80,50" stroke="#3b82f6" stroke-width="2" marker-end="url(#arrowhead-blue)" />
|
| 280 |
+
</g>
|
| 281 |
+
|
| 282 |
+
<g id="sn1-final-product" class="opacity-0">
|
| 283 |
+
<text x="120" y="40" text-anchor="middle" class="text-sm fill-gray-700">CH3-C-CH3</text>
|
| 284 |
+
<text x="120" y="45" text-anchor="middle" class="text-sm fill-gray-700">|</text>
|
| 285 |
+
<text x="120" y="50" text-anchor="middle" class="text-sm fill-gray-700">OH</text>
|
| 286 |
+
</g>
|
| 287 |
+
</svg>
|
| 288 |
+
</div>
|
| 289 |
+
</div>
|
| 290 |
+
</div>
|
| 291 |
+
|
| 292 |
+
<div class="flex flex-col md:flex-row gap-4 mb-6">
|
| 293 |
+
<button onclick="animateSN1()" class="flex-1 bg-purple-600 hover:bg-purple-700 text-white py-3 px-6 rounded-lg transition flex items-center justify-center">
|
| 294 |
+
<i class="fas fa-play-circle mr-2"></i> Animate Mechanism
|
| 295 |
+
</button>
|
| 296 |
+
<button onclick="resetSN1()" class="flex-1 bg-gray-200 hover:bg-gray-300 text-gray-800 py-3 px-6 rounded-lg transition flex items-center justify-center">
|
| 297 |
+
<i class="fas fa-redo mr-2"></i> Reset Animation
|
| 298 |
+
</button>
|
| 299 |
+
</div>
|
| 300 |
+
|
| 301 |
+
<div class="bg-purple-50 border-l-4 border-purple-400 p-4 rounded-r-lg">
|
| 302 |
+
<h4 class="font-bold text-purple-800">Energy Profile:</h4>
|
| 303 |
+
<div class="mt-4">
|
| 304 |
+
<img src="https://chem.libretexts.org/@api/deki/files/36048/CNX_Chem_07_04_Sn1energy.jpeg?revision=1" alt="SN1 energy diagram" class="w-full h-auto rounded">
|
| 305 |
+
<p class="text-sm text-purple-700 mt-2">The energy diagram shows the two-step process with a carbocation intermediate. The first step (formation of carbocation) is the rate-determining step.</p>
|
| 306 |
+
</div>
|
| 307 |
+
</div>
|
| 308 |
+
</div>
|
| 309 |
+
|
| 310 |
+
<!-- E2 Mechanism -->
|
| 311 |
+
<div id="e2-mechanism" class="mechanism-content bg-white rounded-xl shadow-md p-6 hidden">
|
| 312 |
+
<div class="flex justify-between items-center mb-6">
|
| 313 |
+
<h2 class="text-2xl font-bold text-indigo-800">Elimination (E2) Mechanism</h2>
|
| 314 |
+
<span class="bg-teal-100 text-teal-800 px-3 py-1 rounded-full text-sm font-medium">Bimolecular</span>
|
| 315 |
+
</div>
|
| 316 |
+
|
| 317 |
+
<div class="mb-6">
|
| 318 |
+
<p class="text-gray-700 mb-3">E2 reactions involve concerted removal of a proton and a leaving group to form a double bond. The base abstracts a proton while the leaving group departs.</p>
|
| 319 |
+
<div class="bg-teal-50 p-4 rounded-lg">
|
| 320 |
+
<h4 class="font-bold text-teal-700">Key Features:</h4>
|
| 321 |
+
<ul class="list-disc pl-5 mt-2 text-teal-700 space-y-1">
|
| 322 |
+
<li>Concerted mechanism (single step)</li>
|
| 323 |
+
<li>Requires strong base and good leaving group</li>
|
| 324 |
+
<li>Anti-periplanar geometry required</li>
|
| 325 |
+
<li>Rate depends on both substrate and base</li>
|
| 326 |
+
<li>Often competes with SN2 reactions</li>
|
| 327 |
+
</ul>
|
| 328 |
+
</div>
|
| 329 |
+
</div>
|
| 330 |
+
|
| 331 |
+
<div class="mb-8">
|
| 332 |
+
<div class="bg-gray-50 border-2 border-gray-200 rounded-lg p-4">
|
| 333 |
+
<svg viewBox="0 0 800 300" class="w-full h-auto">
|
| 334 |
+
<!-- Substrate -->
|
| 335 |
+
<g class="molecule" id="substrate-e2">
|
| 336 |
+
<text x="150" y="150" class="text-xl font-bold fill-indigo-800">CH3-CH2-Br</text>
|
| 337 |
+
<circle cx="230" cy="150" r="8" fill="#10b981" />
|
| 338 |
+
<text x="230" y="190" class="text-sm fill-gray-600">Leaving Group (Br⁻)</text>
|
| 339 |
+
</g>
|
| 340 |
+
|
| 341 |
+
<!-- Base -->
|
| 342 |
+
<g class="molecule" id="base-e2">
|
| 343 |
+
<text x="450" y="150" class="text-xl font-bold fill-indigo-800">HO⁻</text>
|
| 344 |
+
<circle cx="400" cy="150" r="8" fill="#ec4899" />
|
| 345 |
+
<text x="400" y="190" class="text-sm fill-gray-600">Base (HO⁻)</text>
|
| 346 |
+
</g>
|
| 347 |
+
|
| 348 |
+
<!-- Proton -->
|
| 349 |
+
<g id="proton-e2">
|
| 350 |
+
<circle cx="300" cy="180" r="4" fill="#ef4444" />
|
| 351 |
+
<text x="280" y="170" class="text-xs fill-gray-700">H</text>
|
| 352 |
+
</g>
|
| 353 |
+
|
| 354 |
+
<!-- Electron flow arrows -->
|
| 355 |
+
<path id="e2-base-arrow" class="electron-flow" d="M400,150 Q350,150 300,180" marker-end="url(#arrowhead-pink)" />
|
| 356 |
+
<path id="e2-leaving-arrow" class="electron-flow" d="M230,150 Q265,180 300,180" marker-end="url(#arrowhead-green)" />
|
| 357 |
+
|
| 358 |
+
<defs>
|
| 359 |
+
<marker id="arrowhead-pink" markerWidth="10" markerHeight="7" refX="0" refY="3.5" orient="auto">
|
| 360 |
+
<polygon points="0 0, 10 3.5, 0 7" fill="#ec4899" />
|
| 361 |
+
</marker>
|
| 362 |
+
<marker id="arrowhead-green" markerWidth="10" markerHeight="7" refX="0" refY="3.5" orient="auto">
|
| 363 |
+
<polygon points="0 0, 10 3.5, 0 7" fill="#10b981" />
|
| 364 |
+
</marker>
|
| 365 |
+
</defs>
|
| 366 |
+
|
| 367 |
+
<!-- Product -->
|
| 368 |
+
<g id="product-e2" class="opacity-0">
|
| 369 |
+
<text x="550" y="150" class="text-xl font-bold fill-indigo-800">CH2=CH2 + Br⁻ + H2O</text>
|
| 370 |
+
<text x="550" y="190" class="text-sm fill-gray-600">Products</text>
|
| 371 |
+
</g>
|
| 372 |
+
</svg>
|
| 373 |
+
</div>
|
| 374 |
+
</div>
|
| 375 |
+
|
| 376 |
+
<div class="flex flex-col md:flex-row gap-4 mb-6">
|
| 377 |
+
<button onclick="animateE2()" class="flex-1 bg-teal-600 hover:bg-teal-700 text-white py-3 px-6 rounded-lg transition flex items-center justify-center">
|
| 378 |
+
<i class="fas fa-play-circle mr-2"></i> Animate Mechanism
|
| 379 |
+
</button>
|
| 380 |
+
<button onclick="resetE2()" class="flex-1 bg-gray-200 hover:bg-gray-300 text-gray-800 py-3 px-6 rounded-lg transition flex items-center justify-center">
|
| 381 |
+
<i class="fas fa-redo mr-2"></i> Reset Animation
|
| 382 |
+
</button>
|
| 383 |
+
</div>
|
| 384 |
+
|
| 385 |
+
<div class="bg-teal-50 border-l-4 border-teal-400 p-4 rounded-r-lg">
|
| 386 |
+
<h4 class="font-bold text-teal-800">Stereochemistry:</h4>
|
| 387 |
+
<p class="text-teal-700 mt-2">For cyclohexane systems, the hydrogens and leaving groups must be in the anti position (dihedral angle of 180°). This requirement often determines which product will form when multiple β-hydrogens are available.</p>
|
| 388 |
+
<div class="mt-4 flex justify-center">
|
| 389 |
+
<img src="https://www.chemistrysteps.com/wp-content/uploads/2017/10/e2-anti-coplanar-requirement.png" alt="Anti-periplanar geometry" class="w-64 h-auto rounded">
|
| 390 |
+
</div>
|
| 391 |
+
</div>
|
| 392 |
+
</div>
|
| 393 |
+
|
| 394 |
+
<!-- Additional mechanisms would be similar in structure -->
|
| 395 |
+
<!-- Placeholders for other mechanisms -->
|
| 396 |
+
<div id="e1-mechanism" class="mechanism-content bg-white rounded-xl shadow-md p-6 hidden">
|
| 397 |
+
<div class="text-center py-12">
|
| 398 |
+
<i class="fas fa-flask text-5xl text-indigo-400 mb-4"></i>
|
| 399 |
+
<h3 class="text-xl font-bold text-gray-700">E1 Elimination Mechanism</h3>
|
| 400 |
+
<p class="text-gray-500 mt-2">Coming soon with detailed animations!</p>
|
| 401 |
+
</div>
|
| 402 |
+
</div>
|
| 403 |
+
|
| 404 |
+
<div id="addition-mechanism" class="mechanism-content bg-white rounded-xl shadow-md p-6 hidden">
|
| 405 |
+
<div class="text-center py-12">
|
| 406 |
+
<i class="fas fa-flask text-5xl text-indigo-400 mb-4"></i>
|
| 407 |
+
<h3 class="text-xl font-bold text-gray-700">Electrophilic Addition Mechanism</h3>
|
| 408 |
+
<p class="text-gray-500 mt-2">Coming soon with detailed animations!</p>
|
| 409 |
+
</div>
|
| 410 |
+
</div>
|
| 411 |
+
|
| 412 |
+
<div id="esterification-mechanism" class="mechanism-content bg-white rounded-xl shadow-md p-6 hidden">
|
| 413 |
+
<div class="text-center py-12">
|
| 414 |
+
<i class="fas fa-flask text-5xl text-indigo-400 mb-4"></i>
|
| 415 |
+
<h3 class="text-xl font-bold text-gray-700">Esterification Mechanism</h3>
|
| 416 |
+
<p class="text-gray-500 mt-2">Coming soon with detailed animations!</p>
|
| 417 |
+
</div>
|
| 418 |
+
</div>
|
| 419 |
+
</div>
|
| 420 |
+
</div>
|
| 421 |
+
</main>
|
| 422 |
+
|
| 423 |
+
<footer class="bg-gray-800 text-white py-8 mt-12">
|
| 424 |
+
<div class="container mx-auto px-4">
|
| 425 |
+
<div class="grid grid-cols-1 md:grid-cols-3 gap-8">
|
| 426 |
+
<div>
|
| 427 |
+
<h3 class="text-xl font-bold mb-4">Organic Reaction Explorer</h3>
|
| 428 |
+
<p class="text-gray-400">Interactive platform for learning organic chemistry reaction mechanisms through visualization and animations.</p>
|
| 429 |
+
</div>
|
| 430 |
+
<div>
|
| 431 |
+
<h3 class="text-xl font-bold mb-4">Quick Links</h3>
|
| 432 |
+
<ul class="space-y-2">
|
| 433 |
+
<li><a href="#" class="text-gray-400 hover:text-white transition">Home</a></li>
|
| 434 |
+
<li><a href="#" class="text-gray-400 hover:text-white transition">Reaction Library</a></li>
|
| 435 |
+
<li><a href="#" class="text-gray-400 hover:text-white transition">Practice Problems</a></li>
|
| 436 |
+
<li><a href="#" class="text-gray-400 hover:text-white transition">About</a></li>
|
| 437 |
+
</ul>
|
| 438 |
+
</div>
|
| 439 |
+
<div>
|
| 440 |
+
<h3 class="text-xl font-bold mb-4">Connect</h3>
|
| 441 |
+
<div class="flex space-x-4">
|
| 442 |
+
<a href="#" class="text-2xl text-gray-400 hover:text-white transition"><i class="fab fa-twitter"></i></a>
|
| 443 |
+
<a href="#" class="text-2xl text-gray-400 hover:text-white transition"><i class="fab fa-facebook"></i></a>
|
| 444 |
+
<a href="#" class="text-2xl text-gray-400 hover:text-white transition"><i class="fab fa-instagram"></i></a>
|
| 445 |
+
<a href="#" class="text-2xl text-gray-400 hover:text-white transition"><i class="fab fa-youtube"></i></a>
|
| 446 |
+
</div>
|
| 447 |
+
</div>
|
| 448 |
+
</div>
|
| 449 |
+
<div class="border-t border-gray-700 mt-8 pt-6 text-center text-gray-400">
|
| 450 |
+
<p>© 2023 Organic Reaction Explorer. All rights reserved.</p>
|
| 451 |
+
</div>
|
| 452 |
+
</div>
|
| 453 |
+
</footer>
|
| 454 |
+
|
| 455 |
+
<script>
|
| 456 |
+
// Show the selected mechanism and hide others
|
| 457 |
+
function showMechanism(mechanism) {
|
| 458 |
+
// Hide all mechanism contents
|
| 459 |
+
document.querySelectorAll('.mechanism-content').forEach(el => {
|
| 460 |
+
el.classList.add('hidden');
|
| 461 |
+
});
|
| 462 |
+
|
| 463 |
+
// Hide the intro if it's visible
|
| 464 |
+
document.getElementById('mechanism-intro').classList.add('hidden');
|
| 465 |
+
|
| 466 |
+
// Show the selected mechanism
|
| 467 |
+
document.getElementById(`${mechanism}-mechanism`).classList.remove('hidden');
|
| 468 |
+
}
|
| 469 |
+
|
| 470 |
+
// Animation functions for each mechanism
|
| 471 |
+
function animateSN2() {
|
| 472 |
+
const arrow = document.getElementById('sn2-arrow');
|
| 473 |
+
const transitionState = document.getElementById('transition-state-sn2');
|
| 474 |
+
const product = document.getElementById('product-sn2');
|
| 475 |
+
const substrate = document.getElementById('substrate-sn2');
|
| 476 |
+
const nucleophile = document.getElementById('nucleophile-sn2');
|
| 477 |
+
|
| 478 |
+
// Reset first
|
| 479 |
+
arrow.classList.add('electron-flow');
|
| 480 |
+
transitionState.classList.add('hidden');
|
| 481 |
+
product.classList.add('opacity-0');
|
| 482 |
+
substrate.classList.remove('active-molecule');
|
| 483 |
+
nucleophile.classList.remove('active-molecule');
|
| 484 |
+
|
| 485 |
+
// Animate
|
| 486 |
+
setTimeout(() => {
|
| 487 |
+
substrate.classList.add('active-molecule');
|
| 488 |
+
nucleophile.classList.add('active-molecule');
|
| 489 |
+
}, 500);
|
| 490 |
+
|
| 491 |
+
setTimeout(() => {
|
| 492 |
+
transitionState.classList.remove('hidden');
|
| 493 |
+
transitionState.classList.remove('opacity-0');
|
| 494 |
+
}, 1500);
|
| 495 |
+
|
| 496 |
+
setTimeout(() => {
|
| 497 |
+
product.classList.remove('opacity-0');
|
| 498 |
+
substrate.classList.add('opacity-0');
|
| 499 |
+
nucleophile.classList.add('opacity-0');
|
| 500 |
+
}, 2500);
|
| 501 |
+
}
|
| 502 |
+
|
| 503 |
+
function resetSN2() {
|
| 504 |
+
const arrow = document.getElementById('sn2-arrow');
|
| 505 |
+
const transitionState = document.getElementById('transition-state-sn2');
|
| 506 |
+
const product = document.getElementById('product-sn2');
|
| 507 |
+
const substrate = document.getElementById('substrate-sn2');
|
| 508 |
+
const nucleophile = document.getElementById('nucleophile-sn2');
|
| 509 |
+
|
| 510 |
+
arrow.classList.remove('electron-flow');
|
| 511 |
+
transitionState.classList.add('hidden');
|
| 512 |
+
product.classList.add('opacity-0');
|
| 513 |
+
substrate.classList.remove('opacity-0', 'active-molecule');
|
| 514 |
+
nucleophile.classList.remove('opacity-0', 'active-molecule');
|
| 515 |
+
}
|
| 516 |
+
|
| 517 |
+
function animateSN1() {
|
| 518 |
+
document.getElementById('sn1-leaving-group').classList.remove('opacity-0');
|
| 519 |
+
document.getElementById('sn1-carbocation').classList.remove('opacity-0');
|
| 520 |
+
|
| 521 |
+
setTimeout(() => {
|
| 522 |
+
document.getElementById('sn1-nucleophile').classList.remove('opacity-0');
|
| 523 |
+
document.getElementById('sn1-final-product').classList.remove('opacity-0');
|
| 524 |
+
}, 1500);
|
| 525 |
+
}
|
| 526 |
+
|
| 527 |
+
function resetSN1() {
|
| 528 |
+
document.getElementById('sn1-leaving-group').classList.add('opacity-0');
|
| 529 |
+
document.getElementById('sn1-carbocation').classList.add('opacity-0');
|
| 530 |
+
document.getElementById('sn1-nucleophile').classList.add('opacity-0');
|
| 531 |
+
document.getElementById('sn1-final-product').classList.add('opacity-0');
|
| 532 |
+
}
|
| 533 |
+
|
| 534 |
+
function animateE2() {
|
| 535 |
+
document.getElementById('e2-base-arrow').classList.add('electron-flow');
|
| 536 |
+
document.getElementById('e2-leaving-arrow').classList.add('electron-flow');
|
| 537 |
+
|
| 538 |
+
setTimeout(() => {
|
| 539 |
+
document.getElementById('product-e2').classList.remove('opacity-0');
|
| 540 |
+
document.getElementById('substrate-e2').classList.add('opacity-0');
|
| 541 |
+
document.getElementById('base-e2').classList.add('opacity-0');
|
| 542 |
+
document.getElementById('proton-e2').classList.add('opacity-0');
|
| 543 |
+
}, 2000);
|
| 544 |
+
}
|
| 545 |
+
|
| 546 |
+
function resetE2() {
|
| 547 |
+
document.getElementById('e2-base-arrow').classList.remove('electron-flow');
|
| 548 |
+
document.getElementById('e2-leaving-arrow').classList.remove('electron-flow');
|
| 549 |
+
document.getElementById('product-e2').classList.add('opacity-0');
|
| 550 |
+
document.getElementById('substrate-e2').classList.remove('opacity-0');
|
| 551 |
+
document.getElementById('base-e2').classList.remove('opacity-0');
|
| 552 |
+
document.getElementById('proton-e2').classList.remove('opacity-0');
|
| 553 |
+
}
|
| 554 |
+
|
| 555 |
+
// Show SN2 by default
|
| 556 |
+
window.onload = function() {
|
| 557 |
+
showMechanism('sn2');
|
| 558 |
+
};
|
| 559 |
+
|
| 560 |
+
// Mobile menu toggle
|
| 561 |
+
document.querySelector('.md\\:hidden').addEventListener('click', function() {
|
| 562 |
+
const nav = document.querySelector('nav');
|
| 563 |
+
if (nav.classList.contains('hidden')) {
|
| 564 |
+
nav.classList.remove('hidden');
|
| 565 |
+
nav.classList.add('flex', 'flex-col', 'absolute', 'top-16', 'right-4', 'bg-white', 'shadow-lg', 'rounded-lg', 'p-4', 'z-50');
|
| 566 |
+
} else {
|
| 567 |
+
nav.classList.add('hidden');
|
| 568 |
+
nav.classList.remove('flex', 'flex-col', 'absolute', 'top-16', 'right-4', 'bg-white', 'shadow-lg', 'rounded-lg', 'p-4', 'z-50');
|
| 569 |
+
}
|
| 570 |
+
});
|
| 571 |
+
</script>
|
| 572 |
+
<p style="border-radius: 8px; text-align: center; font-size: 12px; color: #fff; margin-top: 16px;position: fixed; left: 8px; bottom: 8px; z-index: 10; background: rgba(0, 0, 0, 0.8); padding: 4px 8px;">Made with <img src="https://enzostvs-deepsite.hf.space/logo.svg" alt="DeepSite Logo" style="width: 16px; height: 16px; vertical-align: middle;display:inline-block;margin-right:3px;filter:brightness(0) invert(1);"><a href="https://enzostvs-deepsite.hf.space" style="color: #fff;text-decoration: underline;" target="_blank" >DeepSite</a> - 🧬 <a href="https://enzostvs-deepsite.hf.space?remix=AARIFSHABIR/mechanism" style="color: #fff;text-decoration: underline;" target="_blank" >Remix</a></p></body>
|
| 573 |
+
</html>
|
prompts.txt
ADDED
|
@@ -0,0 +1 @@
|
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|
| 1 |
+
Plesae make an app teaching machanism of General organic reactions in a magnificient way
|