updated info message on visualization page
cdefd25
Erva Ulusoy
commited on
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added filtering options for second-degree edge visualization
a1e2231
Erva Ulusoy
commited on
include second degree edges (major update)
14c3500
Erva Ulusoy
commited on
color the edge and node titles based on type
85b27f1
Erva Ulusoy
commited on
updated labels of edge colors in legend
b42cc3c
Erva Ulusoy
commited on
edge title fix
297cd76
Erva Ulusoy
commited on
updated node titles to contain node name instead of id
e0fbc94
Erva Ulusoy
commited on
updated node name info file to include node types other than protein and go
9fb2870
Erva Ulusoy
commited on
updated embedded node information
5cb58d3
Erva Ulusoy
commited on
updated legend layout
31935f9
Erva Ulusoy
commited on
added legend for kg visualization
f465b10
Erva Ulusoy
commited on
updated edge coloring, modified edge labels to more clear ones
67e78f6
Erva Ulusoy
commited on
added coloring to predicted/ground truth go term edges
51641fb
Erva Ulusoy
commited on
added kg visualization feature
8f4b741
Erva Ulusoy
commited on
color generate predictions button red
dbed3d3
adjust generate predictions button placement
9e796bc
changed workflow pdf to png it was not working
1d133b0
Erva Ulusoy
commited on
delete availanle_proteins.txt as it is no longer necessary
0d1479e
Erva Ulusoy
commited on
Update User_Guide.py
3f53680
Erva Ulusoy
commited on
added hyperlinks to uniprot and go ids
9a145bd
Erva Ulusoy
commited on
included protein and go term names in the result df
988f84d
Erva Ulusoy
commited on
enable sidebar fix
42e2260
Erva Ulusoy
commited on
update ProtHGT_app.py
b2ca546
Erva Ulusoy
commited on
fix sidebar enable/disable
8b87470
Erva Ulusoy
commited on
enable sidebar after predictions are made
e021e3c
Erva Ulusoy
commited on
show selected proteins when using example query
e8c701e
make multiselect box scrollable and discard view selected proteins container to only keep download button
eb75910
better explain search process
2643ed2
explain the usage of search proteins menu
25123c8
Erva Ulusoy
commited on
removed redundant button
1e273b2
Erva Ulusoy
commited on
new function to disable sidebar when generating predictions
fb8112c
Erva Ulusoy
commited on
when generating predictions disable the sidebar
abddf21
Erva Ulusoy
commited on
Update ProtHGT_app.py
95173ca
Erva Ulusoy
commited on
make protein id search matching case insensitive
fcbba9e
Erva Ulusoy
commited on
fix example proteins bug
a38fdcd
Erva Ulusoy
commited on
make random choice of example proteins constant for each session
210eeb2
Erva Ulusoy
commited on
disable generate predictions button when there are no new inputs
0ee926e
Erva Ulusoy
commited on
discard the manual reset button
2f8d670
Erva Ulusoy
commited on
removed unnecessary code snippet
94db867
added example query option
7419d2a
Erva Ulusoy
commited on
added fuzzy search feature
da1c3d0
Erva Ulusoy
commited on
added new future work point
867722f
Erva Ulusoy
commited on
Update requirements.txt
4190d38
Erva Ulusoy
commited on
updated requirements
3e01b83
Erva Ulusoy
commited on
fix data load bug
0711e04
Erva Ulusoy
commited on
added env loading placeholder
c520c43
Erva Ulusoy
commited on
added filtering with go ids
7d697ba
Erva Ulusoy
commited on
added pagination to result page
0ab12f7
Erva Ulusoy
commited on
fixed bugs on new edge index assignments
e6abfd3
Erva Ulusoy
commited on
removed unnecessary print
7f3941f
Erva Ulusoy
commited on